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Arabidopsis thaliana

In brief

Arabidopsis thaliana is a small annual flowering plant in the mustard family, Brassicaceae. [1]

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    A06-K
    locator
    Accepted-name header; family; Flora of Tropical East Africa: General
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Photographs and illustrations

Arabidopsis thaliana rosette; accession and age not supplied
Arabidopsis thaliana rosette; accession and age not supplied. Charles Andrès · CC BY-SA 3.0Resized and encoded as WebP; original transparent background retained.
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Introduction

It is both a wild plant of open ground and an experimental organism used to study plant growth and gene function.

[1]
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    Kew Species Profiles: Ecology; introductory research description

How to recognize the plant

A young plant forms a low rosette of leaves, followed by an upright flowering stem with fewer, smaller leaves.

[1]
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    Flora of Tropical East Africa: General, Stem, Leaves

The basal leaves are often spoon-shaped and hairy, while the upper leaves are narrower and attached without a stalk.

[1]
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    Flora of Tropical East Africa: Leaves

Its small flowers have four white petals, four sepals and six stamens.

[1]
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    Kew Species Profiles: Description

After flowering, narrow fruits called siliques hold small reddish-brown seeds.

[1]
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    Flora of Tropical East Africa: Fruits and Seeds

Reproduction and the annual cycle

Arabidopsis is predominantly self-fertilizing: pollen from a plant can fertilize its own flowers.

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    Abstract; Introduction: switch from self-incompatibility to self-compatibility

This is sexual reproduction through pollen and fertilization, rather than the production of seed without fertilization.

[2]
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    Introduction: pollen recognition; Methods: Pollination Assays

Research on different Arabidopsis accessions has linked self-fertility to independently arising changes in the system that otherwise rejects self-pollen.

[2]
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    Abstract; Results: Analysis of pseudo-S-locus haplotypes; Discussion: independent origins

The annual plant eventually produces seed and dies, but its seasonal schedule is not a single fixed calendar.

[1]
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    Flora of Tropical East Africa: General; Kew Species Profiles: Cultivation

In studied wild populations in Sweden and Italy, seeds germinated in autumn and plants overwintered as rosettes before flowering.

[3]
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    Materials and Methods: Study sites and seed collection

Flowering occurred earlier in the Italian population than in the Swedish population, illustrating why a local life cycle needs its environmental context.

[3]
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    Materials and Methods: Study sites and seed collection; Results: Flowering time

Where it grows and how populations differ

Kew places its native range across temperate Eurasia and into the mountains of tropical Africa, with introductions elsewhere.

[1]
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    Accepted-name header; Flora of Tropical East Africa: Distribution

Recorded habitats include rocky or sandy open ground and disturbed places such as gardens and railway margins.

[1]
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    Kew Species Profiles: Geography and distribution; Ecology

A five-year reciprocal-transplant experiment compared plants originating from one Swedish and one Italian population at both home sites.

[3]
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    Summary; Materials and Methods: Study sites and seed collection

The local plants had higher reproductive fitness in eight of ten site-by-year comparisons, with no significant difference in the other two.

[3]
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    Summary: fitness comparisons

Here fitness was estimated from fruit production per planted seed or seedling, so the result describes those populations and that measure rather than every Arabidopsis population.

[3]
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    Summary; Discussion: fruit production as fitness estimator

Why researchers use it

Arabidopsis research connects changes in genes with measurable changes in an entire plant, including its growth and developmental timing.

[4]
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    Abstract: purpose and phenotype framework

Boyes and colleagues established a growth-stage approach using Columbia plants and selected mutants, pairing early seedling observations with measurements of soil-grown plants.

[4]
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    Abstract: two platforms; Col-0 and selected mutants

Such comparisons distinguish a change in development from a difference caused merely by observing plants at different stages.

[4]
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    Abstract: developmental landmarks and interpretation of phenotypic differences

Self-fertilization experiments and field transplants show two complementary uses of the species: testing reproductive mechanisms and examining adaptation in natural environments.

[2] [3]
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    Abstract; Results: transgenic self-incompatibility
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    Summary: reciprocal-transplant experiment

Reproductive mechanism and experimental scope

Boggs and colleagues introduced the Arabidopsis lyrata SRKb–SCRb gene pair into selected Arabidopsis thaliana accessions to test restoration of self-incompatibility.

[2]
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    Results: Identification of accessions that express stable transgenic SI

Their pollination assays assessed pollen-tube responses, and restoration differed between accession backgrounds.

[2]
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    Introduction: accession phenotypes; Methods: Pollination Assays

This links a reproductive phenotype to a particular recognition system without treating all accessions as genetically identical.

[2]
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    Discussion: independent S-locus changes and modifier loci

What the field experiment establishes

The reciprocal-transplant study used one maternal line from each of two populations, with seeds planted in the first three years and seedlings in the final two.

[3]
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    Materials and Methods: Study sites and seed collection; Summary

Differences in survival and reproduction supported local adaptation, but the experiment was not a survey of all native populations.

[3]
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    Results: Overall fitness; Discussion

Comparing developmental observations

The Boyes study combined a two-week seedling platform with soil-based measurements extending for approximately two months.

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    Abstract: platform durations

These are experimental observation windows, not a species-wide promise of the number of days from seed to seed.

[4]
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    Abstract: platforms in Col-0 and selected mutants

The accessible publisher abstract identifies the study design but does not supply the detailed stage tables, so no stage-specific day counts are asserted here.

[4]
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    Publisher page: Abstract; no full text in article-minimal view

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Choose a statement in this article and open its evidence. Record whether it concerns the whole species, a particular specimen or specific study conditions. Then follow a suitable guide to preserve identifiers and state which evidence your question still needs.

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EcoGenesis

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    Sources and versions

    Editorial draft · human review pending

    1. Kew POWO · urn:lsid:ipni.org:names:277970-1

      2026-09-06 · Record components differ: flora/profile CC BY-NC-SA 3.0; backbone CC BY 3.0; individual photo copyright.

      Provenance and original
      Location in the original source
      Accepted-name header; Flora of Tropical East Africa: General, Stem, Leaves, Inflorescences, Flowers, Fruits, Seeds, Ecology, Distribution; Kew Species Profiles: Description, Geography and distribution, Cultivation, Ecology; attached source credits.
    2. PLOS Genetics · 10.1371/journal.pgen.1000426

      2026-09-06 · Publisher states Creative Commons Attribution License; exact version not resolved here.

      Provenance and original
      Location in the original source
      Abstract; Author Summary; Introduction; Results: Identification of accessions with stable transgenic SI and Analysis of pseudo-S-locus haplotypes; Discussion paragraphs on independent origins and unstable QTL; Methods: Plant Growth Conditions and Transformations, Pollination Assays, Analysis of pseudo-S loci.
    3. New Phytologist/Wiley · 10.1111/j.1469-8137.2012.04112.x

      2026-09-06 · Free access is not a blanket reuse license; no figures/data redistributed.

      Provenance and original
      Location in the original source
      Summary; Materials and Methods: Study sites and seed collection and statistical-analysis paragraphs; Results: Temperature, Overall fitness, Relative survival vs winter temperature, Flowering time; Discussion; supplementary descriptions only.
    4. The Plant Cell/Oxford Academic · 10.1105/TPC.010011

      2026-09-06 · © 2001 American Society of Plant Biologists; standard publication model.

      Provenance and original
      Location in the original source
      Publisher minimal article page: title, citation, DOI, dates, complete Abstract, copyright statement.
    Inspect structured data
    Content version
    f4d6152802828da1cb54838adaf02b64b9d5532b0279f3bad520146072ad22f8
    Source version
    editorial-source-set.v1@dd5966b3d611d5896e6d85adac2d1b11bc22fb250d571db56d0a22b18e29b76e
    Updated
    2026-09-19

    Where this organism has been observed

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    Observations and connections with other organisms

    Explore published sightings and reported interactions, such as feeding or pollination. Each record links to its source.

    Research about this organism

    01 · A place in the living world

    Classification

    Explore the tree of life
    1. DomainEukaryota (Chatton, 1925) Whittaker & Margulis, 1978
    2. KingdomPlantae
    3. SubkingdomPteridobiotina Britton & Brown
    4. PhylumTracheophyta
    5. ClassMagnoliopsida
    6. OrderCapparales Juss. ex Bercht. & J.Presl
    7. FamilyBrassicaceae Burnett
    8. SubfamilyBrassicoideae Prantl & Karl
    9. TribeArabidopsideae Al-Shehbaz, Hendriks, M.Koch, F.Lens, Lysak, C.D.Bailey, Mumm. & D.A.German
    10. GenusArabidopsis (DC.) Heynh.
    11. SpeciesArabidopsis thaliana

    02 · From organism to molecules

    Genes, genomes and proteins

    Start with the prepared FLC dataset: chromosome 5 and linked NCBI, UniProt and InterPro records. The molecular data refers to NCBI record 3702 and retains its source versions.

    Genes and transcripts

    FLC · AT5G10140

    1 gene · 1 transcript · 7 exons

    Explore gene →
    Scientific evidence matrix

    Source counts preserve provider-reported totals and may overlap; Loaded is the bounded reproducible payload in this dossier.

    SectionSource recordsLoadedState
    genome40ok
    literature160ok
    media380ok
    protein70ok

    03 · Continue exploring

    Tools and connections

    04 · EcoGenesis

    What the available evidence supports

    Classification and name provenance; a source-attributed description; source records for FLC, its transcript and protein with verified versions.

    A catalogue name does not establish a genome, protein or measurement. Missing records do not mean a trait or gene is absent from the organism.

    Coverage updates as this page checks its sources.

    Sources and licences

    SourceIDLicenceDetails
    colG26R—Source record ↗
    Wikipedia37138CC-BY-SA-4.0Description version ↗