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Escherichia coli

In brief

Escherichia coli occurs in the intestines of people and other animals, but it is also found in water, food and other environmental settings. [3]

Evidence for this statement

Editorial synthesis

Where to check this statement

evidence:editorial:ec3
Overview / where E. coli occurs / most types harmless and some pathogenic
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One species name, different lives

Most types do not cause illness, while some can cause disease.

[3]
Evidence for this statement

Editorial synthesis

Where to check this statement

evidence:editorial:ec3
Overview / where E. coli occurs / most types harmless and some pathogenic

Understanding this contrast requires looking below the species name to the strain and the circumstances in which it is encountered.

[3] [6]
Evidence for this statement

Editorial synthesis

Where to check this statement

evidence:editorial:ec3
Overview / where E. coli occurs / most types harmless and some pathogenic
evidence:editorial:ec6
Abstract; Author Summary; Results / Table 1 study composition and core/pangenome

A rod-shaped cell with a working wall

E. coli is a rod-shaped, Gram-negative bacterium whose peptidoglycan wall helps maintain cell shape against internal pressure.

[4]
Evidence for this statement

Editorial synthesis

Where to check this statement

evidence:editorial:ec4
Introduction; Results / E. coli sacculus architecture; Methods / MC1061

Peptidoglycan is a network of sugar chains joined through short peptide links, rather than an inert shell simply stretched around the cell.

[4]
Evidence for this statement

Editorial synthesis

Where to check this statement

evidence:editorial:ec4
Introduction; Results / E. coli sacculus architecture; Methods / MC1061

Imaging of purified walls from the laboratory strain MC1061 revealed an organised architecture that informed a model of how new wall material is added during elongation.

[4]
Evidence for this statement

Editorial synthesis

Where to check this statement

evidence:editorial:ec4
Introduction; Results / E. coli sacculus architecture; Methods / MC1061

Study material MC1061; architecture-to-growth interpretation is a model, not an observation of every natural strain.

A cell’s familiar outline is therefore connected to the controlled construction and remodelling of its envelope.

[4]
Evidence for this statement

Editorial synthesis

Where to check this statement

evidence:editorial:ec4
Introduction; Results / E. coli sacculus architecture; Methods / MC1061

Cell size and division respond to conditions

During division, E. coli builds a cross-wall while the cell constricts, followed by separation of the two daughter cells.

[8]
Evidence for this statement

Editorial synthesis

Where to check this statement

evidence:editorial:ec8
Abstract; Introduction; Results / pH-dependent size and FtsN; Discussion / daughter separation

This division process is coordinated by interacting proteins rather than being a passive consequence of becoming long enough.

[8]
Evidence for this statement

Editorial synthesis

Where to check this statement

evidence:editorial:ec8
Abstract; Introduction; Results / pH-dependent size and FtsN; Discussion / daughter separation

In a 2020 laboratory study, environmental pH changed cell size and the recruitment of the division protein FtsN to the future division site.

[8]
Evidence for this statement

Editorial synthesis

Where to check this statement

evidence:editorial:ec8
Abstract; Introduction; Results / pH-dependent size and FtsN; Discussion / daughter separation

The size changes occurred independently of changes in mass doubling time in the tested comparisons.

[8]
Evidence for this statement

Editorial synthesis

Where to check this statement

evidence:editorial:ec8
Abstract; Introduction; Results / pH-dependent size and FtsN; Discussion / daughter separation

Swimming can be a biased search

Motile E. coli cells can alternate relatively straight swimming runs with tumbles that change their orientation.

[5]
Evidence for this statement

Editorial synthesis

Where to check this statement

evidence:editorial:ec5
Introduction; Discussion; Materials and Methods / RP437 and derivative

Motile material; not a claim that all E. coli strains swim.

In the studied system, rotating flagella form a propulsive bundle during a run, while changes in rotation disrupt that bundle and help reorient the cell.

[5]
Evidence for this statement

Editorial synthesis

Where to check this statement

evidence:editorial:ec5
Introduction; Discussion; Materials and Methods / RP437 and derivative

Chemotaxis biases this movement by responding to changes in chemical conditions over time, so favourable directions can be followed for longer on average.

[5]
Evidence for this statement

Editorial synthesis

Where to check this statement

evidence:editorial:ec5
Introduction; Discussion; Materials and Methods / RP437 and derivative

It is not a miniature animal seeing a destination; the useful comparison is with a search whose turning behaviour changes in response to local information.

[5]
Evidence for this statement

Editorial synthesis

Where to check this statement

evidence:editorial:ec5
Introduction; Discussion; Materials and Methods / RP437 and derivative

Ecology beyond a laboratory tube

A study of 1,294 Australian isolates examined material collected from humans, poultry, wild animals and water.

[7]
Evidence for this statement

Editorial synthesis

Where to check this statement

evidence:editorial:ec7
Abstract; Results / Australian collection; Methods / sampling and annotation

Australian study collection, not a worldwide census.

The collection spanned 1993–2015 and was used to compare genetic diversity with habitat and evolutionary background.

[7]
Evidence for this statement

Editorial synthesis

Where to check this statement

evidence:editorial:ec7
Abstract; Results / Australian collection; Methods / sampling and annotation

The researchers found associations between those contexts and genome composition, including variation involving mobile genetic elements.

[7]
Evidence for this statement

Editorial synthesis

Where to check this statement

evidence:editorial:ec7
Abstract; Results / Australian collection; Methods / sampling and annotation

Such associations help explain why a water isolate, a gut isolate and a laboratory strain should not be presumed biologically interchangeable.

[7]
Evidence for this statement

Editorial synthesis

Where to check this statement

evidence:editorial:ec7
Abstract; Results / Australian collection; Methods / sampling and annotation

They do not, by themselves, prove that one particular gene caused adaptation to a particular habitat.

[7]
Evidence for this statement

Editorial synthesis

Where to check this statement

evidence:editorial:ec7
Abstract; Results / Australian collection; Methods / sampling and annotation

Why one genome is not the species

Comparative genome research distinguishes a shared core of gene families from a wider collection that varies among the genomes sampled.

[6]
Evidence for this statement

Editorial synthesis

Where to check this statement

evidence:editorial:ec6
Abstract; Author Summary; Results / Table 1 study composition and core/pangenome

Gene acquisition, loss and recombination contribute to this diversity, making a reference genome a useful example rather than a complete catalogue of every strain’s capabilities.

[6]
Evidence for this statement

Editorial synthesis

Where to check this statement

evidence:editorial:ec6
Abstract; Author Summary; Results / Table 1 study composition and core/pangenome

The well-known K-12 substrain MG1655 also has a specific molecular identity: BiGG links assembly GCF_000005845.2 to chromosome NC_000913.3 and to several metabolic models.

[9]
Evidence for this statement

Editorial synthesis

Where to check this statement

evidence:editorial:ec9
Organism; associated models; chromosome NC_000913.3

BiGG record relationship only; no current NCBI annotation certification.

A metabolic model is a representation built around particular assumptions and records, not direct evidence that every reaction operates in every cell.

[9]
Evidence for this statement

Editorial synthesis

Where to check this statement

evidence:editorial:ec9
Organism; associated models; chromosome NC_000913.3

What the name can—and cannot—tell you

The coexistence of usually harmless types and disease-causing types makes both “all E. coli is dangerous” and “E. coli is always harmless” misleading summaries.

[3]
Evidence for this statement

Editorial synthesis

Where to check this statement

evidence:editorial:ec3
Overview / where E. coli occurs / most types harmless and some pathogenic

Scope and reading guidance

This account explains biology; it is not a method for identifying an unknown isolate or deciding whether a clinical or food sample is safe.

Evidence for this statement

Uncited editorial guidance

    Scope and reading guidance

    For a research result, the useful next question is which strain was tested, what was measured and under what conditions.

    Evidence for this statement

    Uncited editorial guidance

      Keep the assigned taxon separate from external records

      The Catalogue of Life page for CS33N identifies Escherichia coli in its title, and its footer reports the 26 August 2026 XR release.

      [1]
      Evidence for this statement

      Editorial synthesis

      Where to check this statement

      evidence:editorial:ec1
      Page title and release footer; 2026-08-26 XR / ChecklistBank 316165

      Title/footer inspection only; taxon-body payload not retrieved.

      Scope and reading guidance

      The complete taxon payload was not recovered in this check, so this page does not establish a fresh provider crosswalk or classification.

      Evidence for this statement

      Uncited editorial guidance

        LPSN separately records E. coli as a species with a validly published name and lists type-strain designations including ATCC 11775 and DSM 30083.

        [2]
        Evidence for this statement

        Editorial synthesis

        Where to check this statement

        evidence:editorial:ec2
        Name, rank, nomenclatural status and type-strain fields

        That nomenclatural type context should not be substituted for the MG1655 genome record used in a molecular comparison.

        [2] [9]
        Evidence for this statement

        Editorial synthesis

        Where to check this statement

        evidence:editorial:ec2
        Name, rank, nomenclatural status and type-strain fields
        evidence:editorial:ec9
        Organism; associated models; chromosome NC_000913.3

        Match the experiment to its material

        The wall-imaging study used MC1061 material, whereas the chemotaxis work identifies RP437 and a derivative in its methods.

        [4] [5]
        Evidence for this statement

        Editorial synthesis

        Where to check this statement

        evidence:editorial:ec4
        Introduction; Results / E. coli sacculus architecture; Methods / MC1061
        evidence:editorial:ec5
        Introduction; Discussion; Materials and Methods / RP437 and derivative

        The latter study combines measured behaviour with a rotational-diffusion model; its simplified tumble description is not a universal account of every chemical gradient.

        [5]
        Evidence for this statement

        Editorial synthesis

        Where to check this statement

        evidence:editorial:ec5
        Introduction; Discussion; Materials and Methods / RP437 and derivative

        Targeted discussion and strain methods; no independent reanalysis.

        The pH study examined laboratory E. coli backgrounds including MG1655 and W3110, rather than a representative panel of all natural isolates.

        [8]
        Evidence for this statement

        Editorial synthesis

        Where to check this statement

        evidence:editorial:ec8
        Abstract; Introduction; Results / pH-dependent size and FtsN; Discussion / daughter separation

        Its FtsN evidence supports a proposed link between environmental conditions and division control, not a species-wide quantitative growth guarantee.

        [8]
        Evidence for this statement

        Editorial synthesis

        Where to check this statement

        evidence:editorial:ec8
        Abstract; Introduction; Results / pH-dependent size and FtsN; Discussion / daughter separation

        Read comparative collections at their actual scope

        The 2009 comparison included 20 E. coli/Shigella genomes and an E. fergusonii genome, under the study’s stated sampling and naming framework.

        [6]
        Evidence for this statement

        Editorial synthesis

        Where to check this statement

        evidence:editorial:ec6
        Abstract; Author Summary; Results / Table 1 study composition and core/pangenome

        That historical comparison is not a new decision to merge present-day Catalogue of Life entries.

        [6]
        Evidence for this statement

        Editorial synthesis

        Where to check this statement

        evidence:editorial:ec6
        Abstract; Author Summary; Results / Table 1 study composition and core/pangenome

        The 2020 Australian collection provides a different sampling frame, not a later release of the same universal species genome.

        [7]
        Evidence for this statement

        Editorial synthesis

        Where to check this statement

        evidence:editorial:ec7
        Abstract; Results / Australian collection; Methods / sampling and annotation

        Core and variable-gene summaries must retain the selected genomes and annotation method because changing the sample changes what can be called shared.

        [6] [7]
        Evidence for this statement

        Editorial synthesis

        Where to check this statement

        evidence:editorial:ec6
        Abstract; Author Summary; Results / Table 1 study composition and core/pangenome
        evidence:editorial:ec7
        Abstract; Results / Australian collection; Methods / sampling and annotation

        Molecular and reuse limits

        Scope and reading guidance

        The BiGG accession relationship was checked, but the underlying NCBI sequence and annotation payloads were not newly imported or independently hashed.

        Evidence for this statement

        Uncited editorial guidance

          The wall-imaging article carries a Creative Commons Attribution-NonCommercial-ShareAlike 3.0 licence, which is not a blanket permission for commercial reuse of its figures.

          [4]
          Evidence for this statement

          Editorial synthesis

          Where to check this statement

          evidence:editorial:ec4
          Introduction; Results / E. coli sacculus architecture; Methods / MC1061

          Exact article-level notice; individual third-party material still needs item-level review.

          Scope and reading guidance

          No external photograph or figure accompanies this article, and no clinical interpretation is supplied.

          Evidence for this statement

          Uncited editorial guidance

            From this article to your own question

            Choose a statement in this article and open its evidence. Record whether it concerns the whole species, a particular specimen or specific study conditions. Then follow a suitable guide to preserve identifiers and state which evidence your question still needs.

            Evidence for this statement

            EcoGenesis

              Continue exploring

              Sources and versions

              Editorial draft · human review pending

              1. Catalogue of Life · Escherichia coli

                2026-09-06 · Reuse permission unverified

                Provenance and original
                Source version
                page footer 2026-08-26 XR; DOI 10.48580/dgyy9
                Location in the original source
                Page title and release footer; 2026-08-26 XR / ChecklistBank 316165
              2. LPSN · Escherichia coli

                2026-09-06 · Reuse permission unverified

                Provenance and original
                Location in the original source
                Name, rank, nomenclatural status and type-strain fields
              3. CDC · About E. coli

                2026-09-06 · Reuse permission unverified

                Provenance and original
                Source version
                page dated 2024-05-14
                Location in the original source
                Overview / where E. coli occurs / most types harmless and some pathogenic
              4. Nature Communications · DOI 10.1038/ncomms2503

                2026-09-06 · CC-BY-NC-SA-3.0

                Provenance and original
                Source version
                2013-02-19
                Location in the original source
                Introduction; Results / E. coli sacculus architecture; Methods / MC1061
              5. PLOS ONE · DOI 10.1371/journal.pone.0035412

                2026-09-06 · CC-BY (notice; exact legal-code version not pinned)

                Provenance and original
                Source version
                2012-04-18
                Location in the original source
                Introduction; Discussion; Materials and Methods / RP437 and derivative
              6. PLOS Genetics · DOI 10.1371/journal.pgen.1000344

                2026-09-06 · CC-BY (notice; exact legal-code version not pinned)

                Provenance and original
                Source version
                2009-01-23
                Location in the original source
                Abstract; Author Summary; Results / Table 1 study composition and core/pangenome
              7. PLOS Genetics · DOI 10.1371/journal.pgen.1008866

                2026-09-06 · CC-BY (notice; exact legal-code version not pinned)

                Provenance and original
                Source version
                2020-06-12
                Location in the original source
                Abstract; Results / Australian collection; Methods / sampling and annotation
              8. PLOS Genetics · DOI 10.1371/journal.pgen.1008685

                2026-09-06 · CC-BY (notice; exact legal-code version not pinned)

                Provenance and original
                Source version
                2020-03-23
                Location in the original source
                Abstract; Introduction; Results / pH-dependent size and FtsN; Discussion / daughter separation
              9. BiGG Models · E. coli K-12 MG1655 genome

                2026-09-06 · Reuse permission unverified

                Provenance and original
                Source version
                GCF_000005845.2 / NC_000913.3
                Location in the original source
                Organism; associated models; chromosome NC_000913.3
              Inspect structured data
              Content version
              fceda76d2ba3c44b34a737abeab0530f29faef52884f55a176d3d403c0256e4c
              Source version
              editorial-source-set.v1@ece661c95dc8576454c0a29d324e084919fe308eaa19bb7f5dda4d18cdfef579
              Updated
              2026-10-01

              Where this organism has been observed

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              Observations and connections with other organisms

              Explore published sightings and reported interactions, such as feeding or pollination. Each record links to its source.

              Research about this organism

              01 · A place in the living world

              Classification

              Explore the tree of life
              1. DomainBacteria Woese et al., 2024
              2. KingdomPseudomonadati (Gibbons & Murray, 1978) Oren & Göker 2024
              3. PhylumPseudomonadota Garrity et al., 2021
              4. ClassGammaproteobacteria Garrity et al., 2005
              5. OrderEnterobacterales Adeolu et al., 2016
              6. FamilyEnterobacteriaceae Rahn, 1937 (Approved Lists 1980)
              7. GenusEscherichia Castellani & Chalmers, 1919 (Approved Lists 1980)
              8. SpeciesEscherichia coli

              02 · From organism to molecules

              Genes, genomes and proteins

              03 · Continue exploring

              Tools and connections

              04 · EcoGenesis

              What the available evidence supports

              Classification and name provenance.

              A catalogue name does not establish a genome, protein or measurement. Missing records do not mean a trait or gene is absent from the organism.

              Coverage updates as this page checks its sources.

              Sources and licences

              SourceIDLicenceDetails
              colCS33N—Source record ↗