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Methanocaldococcus jannaschii

In brief

Methanocaldococcus jannaschii is an archaeon: it belongs to Archaea, a different domain of cellular life from Bacteria. [1]

Evidence for this statement

Editorial synthesis

Where to check this statement

MJ-TAX
current name; homotypic synonym; type strain; Rank; Lineage
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Overview

It is a heat-adapted methane producer first described from material collected at a deep-sea hydrothermal vent.

[4]
Evidence for this statement

Editorial synthesis

Where to check this statement

MJ-DISCOVERY
Abstract; article date and bibliographic information

Its energy economy centres on hydrogen and carbon dioxide rather than sunlight.

[5]
Evidence for this statement

Editorial synthesis

Where to check this statement

MJ-METABOLISM
Abstract and Introduction: hydrogenotrophic methanogenesis equation and chemolithoautotrophy

A small cell from a hot, dark environment

The original description reported motile cells with an irregular, approximately spherical form and a cell envelope that was vulnerable to osmotic disturbance.

[4]
Evidence for this statement

Editorial synthesis

Where to check this statement

MJ-DISCOVERY
Abstract; article date and bibliographic information

These are observations of the described isolate, not a measured size range for every member of the species.

[4]
Evidence for this statement

Editorial synthesis

Where to check this statement

MJ-DISCOVERY
Abstract; article date and bibliographic information

The reference strain is known as JAL-1, with culture-collection designations including DSM 2661 and ATCC 43067.

[2]
Evidence for this statement

Editorial synthesis

Where to check this statement

MJ-NAME
Name; Basonym; Type strain; Valid publication; Nomenclatural status

BacDive identifies that strain as anaerobic, meaning its documented growth physiology does not depend on oxygen.

[3]
Evidence for this statement

Editorial synthesis

Where to check this statement

MJ-TYPE
General information; oxygen tolerance; pathway presence (explicitly computational)

Making methane without light

Hydrogenotrophic methanogenesis uses hydrogen to reduce carbon dioxide, producing methane and water.

[5]
Evidence for this statement

Editorial synthesis

Where to check this statement

MJ-METABOLISM
Abstract and Introduction: hydrogenotrophic methanogenesis equation and chemolithoautotrophy

A simplified balanced reaction is 4 H₂ + CO₂ → CH₄ + 2 H₂O.

[5]
Evidence for this statement

Editorial synthesis

Where to check this statement

MJ-METABOLISM
Abstract and Introduction: hydrogenotrophic methanogenesis equation and chemolithoautotrophy

M. jannaschii is described as chemolithoautotrophic: inorganic chemistry supplies its energy, and inorganic carbon can supply the carbon used to build its cells.

[5]
Evidence for this statement

Editorial synthesis

Where to check this statement

MJ-METABOLISM
Abstract and Introduction: hydrogenotrophic methanogenesis equation and chemolithoautotrophy

In this system, methane production and cell growth are related processes, but methane is the metabolic product rather than the organism’s food.

[5]
Evidence for this statement

Editorial synthesis

Where to check this statement

MJ-METABOLISM
Abstract and Introduction: hydrogenotrophic methanogenesis equation and chemolithoautotrophy

Experiments found that lower hydrogen availability reduced both growth and methane production per cell.

[7]
Evidence for this statement

Editorial synthesis

Where to check this statement

MJ-HYDROGEN
Abstract, especially growth and methane production with changing hydrogen availability; Rights

In a coculture with the hydrogen-producing archaeon Thermococcus paralvinellae, M. jannaschii grew more slowly but produced more cells per mole of methane than in the comparison monocultures.

[7]
Evidence for this statement

Editorial synthesis

Where to check this statement

MJ-HYDROGEN
Abstract, especially growth and methane production with changing hydrogen availability; Rights

This is a useful reminder that growth rate, yield and methane output are different measurements: a cell population can change one without changing the others in the same way.

[7]
Evidence for this statement

Editorial synthesis

Where to check this statement

MJ-HYDROGEN
Abstract, especially growth and methane production with changing hydrogen availability; Rights

Division and a variable number of chromosomes

Microscopy and DNA-content work found multiple chromosome copies in growing M. jannaschii cells.

[6]
Evidence for this statement

Editorial synthesis

Where to check this statement

MJ-DIVIDE
Abstract: exponential versus stationary phase; chromosome copies; cell division and nucleoids

In the stationary-phase cells examined, chromosome counts ranged from one to five, with most cells carrying more than one copy.

[6]
Evidence for this statement

Editorial synthesis

Where to check this statement

MJ-DIVIDE
Abstract: exponential versus stationary phase; chromosome copies; cell division and nucleoids

The study also recorded asymmetric cell divisions and changes in the organisation of the nucleoid, the region occupied by chromosomal DNA.

[6]
Evidence for this statement

Editorial synthesis

Where to check this statement

MJ-DIVIDE
Abstract: exponential versus stationary phase; chromosome copies; cell division and nucleoids

It would therefore be misleading to picture every cell as holding one chromosome or to label five copies as an invariant species characteristic.

[6]
Evidence for this statement

Editorial synthesis

Where to check this statement

MJ-DIVIDE
Abstract: exponential versus stationary phase; chromosome copies; cell division and nucleoids

What its vent origin tells us

The original sample came from the base of a white-smoker chimney on the East Pacific Rise, at a reported depth of 2,600 metres.

[4]
Evidence for this statement

Editorial synthesis

Where to check this statement

MJ-DISCOVERY
Abstract; article date and bibliographic information

The original investigators also documented laboratory growth at 85 °C.

[4]
Evidence for this statement

Editorial synthesis

Where to check this statement

MJ-DISCOVERY
Abstract; article date and bibliographic information

Together, these observations establish a deep-sea origin and an ability to grow at high temperature, without defining a worldwide distribution.

[4]
Evidence for this statement

Editorial synthesis

Where to check this statement

MJ-DISCOVERY
Abstract; article date and bibliographic information

The hydrogen-limitation experiments suggest that access to hydrogen, including hydrogen supplied by neighbouring microbes, can influence methane production in hot subseafloor communities.

[7]
Evidence for this statement

Editorial synthesis

Where to check this statement

MJ-HYDROGEN
Abstract, especially growth and methane production with changing hydrogen availability; Rights

They do not by themselves establish how much methane this species contributes to the ocean or atmosphere.

[7]
Evidence for this statement

Editorial synthesis

Where to check this statement

MJ-HYDROGEN
Abstract, especially growth and methane production with changing hydrogen availability; Rights

Why genome researchers know the name

The 1996 genome report described a main genome of about 1.66 million base pairs plus two smaller extrachromosomal elements.

[8]
Evidence for this statement

Editorial synthesis

Where to check this statement

MJ-GENOME
Abstract; publication date and DOI

Its sequence comparison found many metabolic genes resembling bacterial counterparts, while much of the machinery for handling genetic information showed stronger similarity to eukaryotic counterparts.

[8]
Evidence for this statement

Editorial synthesis

Where to check this statement

MJ-GENOME
Abstract; publication date and DOI

That combination made the organism informative for comparing cellular systems; it did not make it a modern bacterium–eukaryote hybrid.

[8] [1]
Evidence for this statement

Editorial synthesis

Where to check this statement

MJ-GENOME
Abstract; publication date and DOI
MJ-TAX
current name; homotypic synonym; type strain; Rank; Lineage

Older research calls the organism Methanococcus jannaschii, while the currently accepted combination is Methanocaldococcus jannaschii.

[2]
Evidence for this statement

Editorial synthesis

Where to check this statement

MJ-NAME
Name; Basonym; Type strain; Valid publication; Nomenclatural status

Recognising the older name helps readers connect the original physiological and genome papers to the same named species.

[2] [8]
Evidence for this statement

Editorial synthesis

Where to check this statement

MJ-NAME
Name; Basonym; Type strain; Valid publication; Nomenclatural status
MJ-GENOME
Abstract; publication date and DOI

Questions readers often ask

Is it a bacterium because early papers used that word?

[1] [4]
Evidence for this statement

Editorial synthesis

Where to check this statement

MJ-TAX
current name; homotypic synonym; type strain; Rank; Lineage
MJ-DISCOVERY
Abstract; article date and bibliographic information

No: the current taxonomic placement is in Archaea, even though terminology in historical descriptions can differ.

[1]
Evidence for this statement

Editorial synthesis

Where to check this statement

MJ-TAX
current name; homotypic synonym; type strain; Rank; Lineage

Does it need sunlight to make methane?

[5]
Evidence for this statement

Editorial synthesis

Where to check this statement

MJ-METABOLISM
Abstract and Introduction: hydrogenotrophic methanogenesis equation and chemolithoautotrophy

No: the documented energy pathway uses hydrogen and carbon dioxide.

[5]
Evidence for this statement

Editorial synthesis

Where to check this statement

MJ-METABOLISM
Abstract and Introduction: hydrogenotrophic methanogenesis equation and chemolithoautotrophy

Does the vent sample prove that it lives at every hydrothermal vent?

[4]
Evidence for this statement

Editorial synthesis

Where to check this statement

MJ-DISCOVERY
Abstract; article date and bibliographic information

No: an isolation locality is evidence for that collection, not a complete distribution map.

[4]
Evidence for this statement

Editorial synthesis

Where to check this statement

MJ-DISCOVERY
Abstract; article date and bibliographic information

Name, date and material

The identity retained here is ncbi_taxonomy:2190, currently a species-rank NCBI record.

[1]
Evidence for this statement

Editorial synthesis

Where to check this statement

MJ-TAX
current name; homotypic synonym; type strain; Rank; Lineage

The original paper appeared in 1983, the basionym was validated in 1984, and LPSN dates the valid combination Methanocaldococcus jannaschii to Whitman 2002.

[4] [2]
Evidence for this statement

Editorial synthesis

Where to check this statement

MJ-DISCOVERY
Abstract; article date and bibliographic information
MJ-NAME
Name; Basonym; Type strain; Valid publication; Nomenclatural status

JAL-1, DSM 2661 and ATCC 43067 are linked type-strain designations, not three independently sampled species or three independent genome references.

[2]
Evidence for this statement

Editorial synthesis

Where to check this statement

MJ-NAME
Name; Basonym; Type strain; Valid publication; Nomenclatural status

Physiology and experimental scope

The primary metabolic account supports hydrogenotrophic methanogenesis and chemolithoautotrophy, rather than a claim of photosynthetic growth.

[5]
Evidence for this statement

Editorial synthesis

Where to check this statement

MJ-METABOLISM
Abstract and Introduction: hydrogenotrophic methanogenesis equation and chemolithoautotrophy

BacDive’s pathway-presence table is explicitly computational, so a predicted pathway label there is not treated as experimental evidence for whole-cell physiology.

[3]
Evidence for this statement

Editorial synthesis

Where to check this statement

MJ-TYPE
General information; oxygen tolerance; pathway presence (explicitly computational)

The hydrogen-transfer study compares monocultures with a Thermococcus paralvinellae coculture and separately measures growth rate, cell-specific methane production and yield.

[7]
Evidence for this statement

Editorial synthesis

Where to check this statement

MJ-HYDROGEN
Abstract, especially growth and methane production with changing hydrogen availability; Rights

Its repository abstract is sufficient for those qualitative comparisons, but the rendered hydrogen-concentration units are not carried into this article as a quantitative dataset.

[7]
Evidence for this statement

Editorial synthesis

Where to check this statement

MJ-HYDROGEN
Abstract, especially growth and methane production with changing hydrogen availability; Rights

Cell cycle and genome are different measurements

Malandrin and colleagues’ abstract associates chromosome copy number and nucleoid organisation with culture growth phase.

[6]
Evidence for this statement

Editorial synthesis

Where to check this statement

MJ-DIVIDE
Abstract: exponential versus stationary phase; chromosome copies; cell division and nucleoids

A chromosome-copy count is a cellular state measurement, whereas the length of a reference sequence is a measurement of an assembled genetic representation.

[6] [8]
Evidence for this statement

Editorial synthesis

Where to check this statement

MJ-DIVIDE
Abstract: exponential versus stationary phase; chromosome copies; cell division and nucleoids
MJ-GENOME
Abstract; publication date and DOI

The 1.66-million-base-pair figure belongs to the 1996 genome report and is not presented as a newly checked accession-specific assembly span.

[8]
Evidence for this statement

Editorial synthesis

Where to check this statement

MJ-GENOME
Abstract; publication date and DOI

The historical comparison of informational and metabolic genes is retained at the level stated in that report, without assigning this living species the status of a direct ancestor of other modern lineages.

[8]
Evidence for this statement

Editorial synthesis

Where to check this statement

MJ-GENOME
Abstract; publication date and DOI

From this article to your own question

Choose a statement in this article and open its evidence. Record whether it concerns the whole species, a particular specimen or specific study conditions. Then follow a suitable guide to preserve identifiers and state which evidence your question still needs.

Evidence for this statement

EcoGenesis

    Continue exploring

    Sources and versions

    Editorial draft · human review pending

    1. NCBI Taxonomy: Methanocaldococcus jannaschii, Taxonomy ID 2190

      2026-09-06 · Reuse permission unverified

      Provenance and original
      Location in the original source
      current name; homotypic synonym; type strain; Rank; Lineage
    2. LPSN: Methanocaldococcus jannaschii

      2026-09-06 · Reuse permission unverified

      Provenance and original
      Location in the original source
      Name; Basonym; Type strain; Valid publication; Nomenclatural status
    3. BacDive: Methanocaldococcus jannaschii JAL-1, strain 6981

      2026-09-06 · Reuse permission unverified

      Provenance and original
      Location in the original source
      General information; oxygen tolerance; pathway presence (explicitly computational)
    4. Jones et al. (1983), Methanococcus jannaschii sp. nov., an extremely thermophilic methanogen from a submarine hydrothermal vent

      2026-09-06 · Reuse permission unverified

      Provenance and original
      Location in the original source
      Abstract; article date and bibliographic information
    5. Susanti, Frazier and Mukhopadhyay (2019), A Genetic System for Methanocaldococcus jannaschii

      2026-09-06 · Reuse permission unverified

      Provenance and original
      Location in the original source
      Abstract and Introduction: hydrogenotrophic methanogenesis equation and chemolithoautotrophy
    6. Malandrin, Huber and Bernander (1999), Nucleoid structure and partition in Methanococcus jannaschii

      2026-09-06 · Reuse permission unverified

      Provenance and original
      Location in the original source
      Abstract: exponential versus stationary phase; chromosome copies; cell division and nucleoids
    7. Topçuoğlu et al. (2019), Growth Kinetics, Carbon Isotope Fractionation, and Gene Expression in the Hyperthermophile Methanocaldococcus jannaschii during Hydrogen-Limited Growth and Interspecies Hydrogen Transfer

      2026-09-06 · Reuse permission unverified

      Provenance and original
      Location in the original source
      Abstract, especially growth and methane production with changing hydrogen availability; Rights
    8. Bult et al. (1996), Complete genome sequence of the methanogenic archaeon, Methanococcus jannaschii

      2026-09-06 · Reuse permission unverified

      Provenance and original
      Location in the original source
      Abstract; publication date and DOI
    Inspect structured data
    Content version
    2b143444f989a56e6c7467a22c179e07563a786f499352c0db33fa9fe98daea8
    Source version
    editorial-source-set.v1@1ecd5234f5ad3cde18b06a5bf488e56603f8e93bb3ee6a9bf2d01cb1e470fba3
    Updated
    2026-10-01

    Where this organism has been observed

    Explore observations on the map →

    Observations and connections with other organisms

    Explore published sightings and reported interactions, such as feeding or pollination. Each record links to its source.

    Research about this organism

    01 · A place in the living world

    Classification

    Explore the tree of life
    1. No rankcellular organisms
    2. DomainArchaea
    3. KingdomMethanobacteriati
    4. PhylumMethanobacteriota
    5. CladeMethanomada group
    6. ClassMethanococci
    7. OrderMethanococcales
    8. FamilyMethanocaldococcaceae
    9. GenusMethanocaldococcus
    10. SpeciesMethanocaldococcus jannaschii

    02 · From organism to molecules

    Genes, genomes and proteins

    03 · Continue exploring

    Tools and connections

    04 · EcoGenesis

    What the available evidence supports

    Classification and name provenance; a source-attributed description.

    A catalogue name does not establish a genome, protein or measurement. Missing records do not mean a trait or gene is absent from the organism.

    Coverage updates as this page checks its sources.

    Sources and licences

    SourceIDLicenceDetails
    UniProt Taxonomy2190CC-BY-4.0Source record ↗
    UniProt Taxonomy2190CC-BY-4.0Description version ↗