Methanocaldococcus jannaschii
In brief
Methanocaldococcus jannaschii is an archaeon: it belongs to Archaea, a different domain of cellular life from Bacteria. [1]
Evidence for this statement
Editorial synthesis
Where to check this statement
- MJ-TAX
- current name; homotypic synonym; type strain; Rank; Lineage
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Overview
It is a heat-adapted methane producer first described from material collected at a deep-sea hydrothermal vent.
[4]Evidence for this statement
Editorial synthesis
Where to check this statement
- MJ-DISCOVERY
- Abstract; article date and bibliographic information
Its energy economy centres on hydrogen and carbon dioxide rather than sunlight.
[5]Evidence for this statement
Editorial synthesis
Where to check this statement
- MJ-METABOLISM
- Abstract and Introduction: hydrogenotrophic methanogenesis equation and chemolithoautotrophy
A small cell from a hot, dark environment
The original description reported motile cells with an irregular, approximately spherical form and a cell envelope that was vulnerable to osmotic disturbance.
[4]Evidence for this statement
Editorial synthesis
Where to check this statement
- MJ-DISCOVERY
- Abstract; article date and bibliographic information
These are observations of the described isolate, not a measured size range for every member of the species.
[4]Evidence for this statement
Editorial synthesis
Where to check this statement
- MJ-DISCOVERY
- Abstract; article date and bibliographic information
The reference strain is known as JAL-1, with culture-collection designations including DSM 2661 and ATCC 43067.
[2]Evidence for this statement
Editorial synthesis
Where to check this statement
- MJ-NAME
- Name; Basonym; Type strain; Valid publication; Nomenclatural status
BacDive identifies that strain as anaerobic, meaning its documented growth physiology does not depend on oxygen.
[3]Evidence for this statement
Editorial synthesis
Where to check this statement
- MJ-TYPE
- General information; oxygen tolerance; pathway presence (explicitly computational)
Making methane without light
Hydrogenotrophic methanogenesis uses hydrogen to reduce carbon dioxide, producing methane and water.
[5]Evidence for this statement
Editorial synthesis
Where to check this statement
- MJ-METABOLISM
- Abstract and Introduction: hydrogenotrophic methanogenesis equation and chemolithoautotrophy
A simplified balanced reaction is 4 H₂ + CO₂ → CH₄ + 2 H₂O.
[5]Evidence for this statement
Editorial synthesis
Where to check this statement
- MJ-METABOLISM
- Abstract and Introduction: hydrogenotrophic methanogenesis equation and chemolithoautotrophy
M. jannaschii is described as chemolithoautotrophic: inorganic chemistry supplies its energy, and inorganic carbon can supply the carbon used to build its cells.
[5]Evidence for this statement
Editorial synthesis
Where to check this statement
- MJ-METABOLISM
- Abstract and Introduction: hydrogenotrophic methanogenesis equation and chemolithoautotrophy
In this system, methane production and cell growth are related processes, but methane is the metabolic product rather than the organism’s food.
[5]Evidence for this statement
Editorial synthesis
Where to check this statement
- MJ-METABOLISM
- Abstract and Introduction: hydrogenotrophic methanogenesis equation and chemolithoautotrophy
Experiments found that lower hydrogen availability reduced both growth and methane production per cell.
[7]Evidence for this statement
Editorial synthesis
Where to check this statement
- MJ-HYDROGEN
- Abstract, especially growth and methane production with changing hydrogen availability; Rights
In a coculture with the hydrogen-producing archaeon Thermococcus paralvinellae, M. jannaschii grew more slowly but produced more cells per mole of methane than in the comparison monocultures.
[7]Evidence for this statement
Editorial synthesis
Where to check this statement
- MJ-HYDROGEN
- Abstract, especially growth and methane production with changing hydrogen availability; Rights
This is a useful reminder that growth rate, yield and methane output are different measurements: a cell population can change one without changing the others in the same way.
[7]Evidence for this statement
Editorial synthesis
Where to check this statement
- MJ-HYDROGEN
- Abstract, especially growth and methane production with changing hydrogen availability; Rights
Division and a variable number of chromosomes
Microscopy and DNA-content work found multiple chromosome copies in growing M. jannaschii cells.
[6]Evidence for this statement
Editorial synthesis
Where to check this statement
- MJ-DIVIDE
- Abstract: exponential versus stationary phase; chromosome copies; cell division and nucleoids
In the stationary-phase cells examined, chromosome counts ranged from one to five, with most cells carrying more than one copy.
[6]Evidence for this statement
Editorial synthesis
Where to check this statement
- MJ-DIVIDE
- Abstract: exponential versus stationary phase; chromosome copies; cell division and nucleoids
The study also recorded asymmetric cell divisions and changes in the organisation of the nucleoid, the region occupied by chromosomal DNA.
[6]Evidence for this statement
Editorial synthesis
Where to check this statement
- MJ-DIVIDE
- Abstract: exponential versus stationary phase; chromosome copies; cell division and nucleoids
It would therefore be misleading to picture every cell as holding one chromosome or to label five copies as an invariant species characteristic.
[6]Evidence for this statement
Editorial synthesis
Where to check this statement
- MJ-DIVIDE
- Abstract: exponential versus stationary phase; chromosome copies; cell division and nucleoids
What its vent origin tells us
The original sample came from the base of a white-smoker chimney on the East Pacific Rise, at a reported depth of 2,600 metres.
[4]Evidence for this statement
Editorial synthesis
Where to check this statement
- MJ-DISCOVERY
- Abstract; article date and bibliographic information
The original investigators also documented laboratory growth at 85 °C.
[4]Evidence for this statement
Editorial synthesis
Where to check this statement
- MJ-DISCOVERY
- Abstract; article date and bibliographic information
Together, these observations establish a deep-sea origin and an ability to grow at high temperature, without defining a worldwide distribution.
[4]Evidence for this statement
Editorial synthesis
Where to check this statement
- MJ-DISCOVERY
- Abstract; article date and bibliographic information
The hydrogen-limitation experiments suggest that access to hydrogen, including hydrogen supplied by neighbouring microbes, can influence methane production in hot subseafloor communities.
[7]Evidence for this statement
Editorial synthesis
Where to check this statement
- MJ-HYDROGEN
- Abstract, especially growth and methane production with changing hydrogen availability; Rights
They do not by themselves establish how much methane this species contributes to the ocean or atmosphere.
[7]Evidence for this statement
Editorial synthesis
Where to check this statement
- MJ-HYDROGEN
- Abstract, especially growth and methane production with changing hydrogen availability; Rights
Why genome researchers know the name
The 1996 genome report described a main genome of about 1.66 million base pairs plus two smaller extrachromosomal elements.
[8]Evidence for this statement
Editorial synthesis
Where to check this statement
- MJ-GENOME
- Abstract; publication date and DOI
Its sequence comparison found many metabolic genes resembling bacterial counterparts, while much of the machinery for handling genetic information showed stronger similarity to eukaryotic counterparts.
[8]Evidence for this statement
Editorial synthesis
Where to check this statement
- MJ-GENOME
- Abstract; publication date and DOI
That combination made the organism informative for comparing cellular systems; it did not make it a modern bacterium–eukaryote hybrid.
[8] [1]Evidence for this statement
Editorial synthesis
- Bult et al. (1996), Complete genome sequence of the methanogenic archaeon, Methanococcus jannaschii
- NCBI Taxonomy: Methanocaldococcus jannaschii, Taxonomy ID 2190
Where to check this statement
- MJ-GENOME
- Abstract; publication date and DOI
- MJ-TAX
- current name; homotypic synonym; type strain; Rank; Lineage
Older research calls the organism Methanococcus jannaschii, while the currently accepted combination is Methanocaldococcus jannaschii.
[2]Evidence for this statement
Editorial synthesis
Where to check this statement
- MJ-NAME
- Name; Basonym; Type strain; Valid publication; Nomenclatural status
Recognising the older name helps readers connect the original physiological and genome papers to the same named species.
[2] [8]Evidence for this statement
Editorial synthesis
- LPSN: Methanocaldococcus jannaschii
- Bult et al. (1996), Complete genome sequence of the methanogenic archaeon, Methanococcus jannaschii
Where to check this statement
- MJ-NAME
- Name; Basonym; Type strain; Valid publication; Nomenclatural status
- MJ-GENOME
- Abstract; publication date and DOI
Questions readers often ask
Is it a bacterium because early papers used that word?
[1] [4]Evidence for this statement
Editorial synthesis
- NCBI Taxonomy: Methanocaldococcus jannaschii, Taxonomy ID 2190
- Jones et al. (1983), Methanococcus jannaschii sp. nov., an extremely thermophilic methanogen from a submarine hydrothermal vent
Where to check this statement
- MJ-TAX
- current name; homotypic synonym; type strain; Rank; Lineage
- MJ-DISCOVERY
- Abstract; article date and bibliographic information
No: the current taxonomic placement is in Archaea, even though terminology in historical descriptions can differ.
[1]Evidence for this statement
Editorial synthesis
Where to check this statement
- MJ-TAX
- current name; homotypic synonym; type strain; Rank; Lineage
Does it need sunlight to make methane?
[5]Evidence for this statement
Editorial synthesis
Where to check this statement
- MJ-METABOLISM
- Abstract and Introduction: hydrogenotrophic methanogenesis equation and chemolithoautotrophy
No: the documented energy pathway uses hydrogen and carbon dioxide.
[5]Evidence for this statement
Editorial synthesis
Where to check this statement
- MJ-METABOLISM
- Abstract and Introduction: hydrogenotrophic methanogenesis equation and chemolithoautotrophy
Does the vent sample prove that it lives at every hydrothermal vent?
[4]Evidence for this statement
Editorial synthesis
Where to check this statement
- MJ-DISCOVERY
- Abstract; article date and bibliographic information
No: an isolation locality is evidence for that collection, not a complete distribution map.
[4]Evidence for this statement
Editorial synthesis
Where to check this statement
- MJ-DISCOVERY
- Abstract; article date and bibliographic information
Name, date and material
The identity retained here is ncbi_taxonomy:2190, currently a species-rank NCBI record.
[1]Evidence for this statement
Editorial synthesis
Where to check this statement
- MJ-TAX
- current name; homotypic synonym; type strain; Rank; Lineage
The original paper appeared in 1983, the basionym was validated in 1984, and LPSN dates the valid combination Methanocaldococcus jannaschii to Whitman 2002.
[4] [2]Evidence for this statement
Editorial synthesis
- Jones et al. (1983), Methanococcus jannaschii sp. nov., an extremely thermophilic methanogen from a submarine hydrothermal vent
- LPSN: Methanocaldococcus jannaschii
Where to check this statement
- MJ-DISCOVERY
- Abstract; article date and bibliographic information
- MJ-NAME
- Name; Basonym; Type strain; Valid publication; Nomenclatural status
JAL-1, DSM 2661 and ATCC 43067 are linked type-strain designations, not three independently sampled species or three independent genome references.
[2]Evidence for this statement
Editorial synthesis
Where to check this statement
- MJ-NAME
- Name; Basonym; Type strain; Valid publication; Nomenclatural status
Physiology and experimental scope
The primary metabolic account supports hydrogenotrophic methanogenesis and chemolithoautotrophy, rather than a claim of photosynthetic growth.
[5]Evidence for this statement
Editorial synthesis
Where to check this statement
- MJ-METABOLISM
- Abstract and Introduction: hydrogenotrophic methanogenesis equation and chemolithoautotrophy
BacDive’s pathway-presence table is explicitly computational, so a predicted pathway label there is not treated as experimental evidence for whole-cell physiology.
[3]Evidence for this statement
Editorial synthesis
Where to check this statement
- MJ-TYPE
- General information; oxygen tolerance; pathway presence (explicitly computational)
The hydrogen-transfer study compares monocultures with a Thermococcus paralvinellae coculture and separately measures growth rate, cell-specific methane production and yield.
[7]Evidence for this statement
Editorial synthesis
Where to check this statement
- MJ-HYDROGEN
- Abstract, especially growth and methane production with changing hydrogen availability; Rights
Its repository abstract is sufficient for those qualitative comparisons, but the rendered hydrogen-concentration units are not carried into this article as a quantitative dataset.
[7]Evidence for this statement
Editorial synthesis
Where to check this statement
- MJ-HYDROGEN
- Abstract, especially growth and methane production with changing hydrogen availability; Rights
Cell cycle and genome are different measurements
Malandrin and colleagues’ abstract associates chromosome copy number and nucleoid organisation with culture growth phase.
[6]Evidence for this statement
Editorial synthesis
Where to check this statement
- MJ-DIVIDE
- Abstract: exponential versus stationary phase; chromosome copies; cell division and nucleoids
A chromosome-copy count is a cellular state measurement, whereas the length of a reference sequence is a measurement of an assembled genetic representation.
[6] [8]Evidence for this statement
Editorial synthesis
- Malandrin, Huber and Bernander (1999), Nucleoid structure and partition in Methanococcus jannaschii
- Bult et al. (1996), Complete genome sequence of the methanogenic archaeon, Methanococcus jannaschii
Where to check this statement
- MJ-DIVIDE
- Abstract: exponential versus stationary phase; chromosome copies; cell division and nucleoids
- MJ-GENOME
- Abstract; publication date and DOI
The 1.66-million-base-pair figure belongs to the 1996 genome report and is not presented as a newly checked accession-specific assembly span.
[8]Evidence for this statement
Editorial synthesis
Where to check this statement
- MJ-GENOME
- Abstract; publication date and DOI
The historical comparison of informational and metabolic genes is retained at the level stated in that report, without assigning this living species the status of a direct ancestor of other modern lineages.
[8]Evidence for this statement
Editorial synthesis
Where to check this statement
- MJ-GENOME
- Abstract; publication date and DOI
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Choose a statement in this article and open its evidence. Record whether it concerns the whole species, a particular specimen or specific study conditions. Then follow a suitable guide to preserve identifiers and state which evidence your question still needs.
Evidence for this statement
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Sources and versions
Editorial draft · human review pending
- NCBI Taxonomy: Methanocaldococcus jannaschii, Taxonomy ID 2190
2026-09-06 · Reuse permission unverified
Provenance and original
- Location in the original source
- current name; homotypic synonym; type strain; Rank; Lineage
- LPSN: Methanocaldococcus jannaschii
2026-09-06 · Reuse permission unverified
Provenance and original
- Location in the original source
- Name; Basonym; Type strain; Valid publication; Nomenclatural status
- BacDive: Methanocaldococcus jannaschii JAL-1, strain 6981
2026-09-06 · Reuse permission unverified
Provenance and original
- Location in the original source
- General information; oxygen tolerance; pathway presence (explicitly computational)
- Jones et al. (1983), Methanococcus jannaschii sp. nov., an extremely thermophilic methanogen from a submarine hydrothermal vent
2026-09-06 · Reuse permission unverified
Provenance and original
- Location in the original source
- Abstract; article date and bibliographic information
- Susanti, Frazier and Mukhopadhyay (2019), A Genetic System for Methanocaldococcus jannaschii
2026-09-06 · Reuse permission unverified
Provenance and original
- Location in the original source
- Abstract and Introduction: hydrogenotrophic methanogenesis equation and chemolithoautotrophy
- Malandrin, Huber and Bernander (1999), Nucleoid structure and partition in Methanococcus jannaschii
2026-09-06 · Reuse permission unverified
Provenance and original
- Location in the original source
- Abstract: exponential versus stationary phase; chromosome copies; cell division and nucleoids
- Topçuoğlu et al. (2019), Growth Kinetics, Carbon Isotope Fractionation, and Gene Expression in the Hyperthermophile Methanocaldococcus jannaschii during Hydrogen-Limited Growth and Interspecies Hydrogen Transfer
2026-09-06 · Reuse permission unverified
Provenance and original
- Location in the original source
- Abstract, especially growth and methane production with changing hydrogen availability; Rights
- Bult et al. (1996), Complete genome sequence of the methanogenic archaeon, Methanococcus jannaschii
2026-09-06 · Reuse permission unverified
Provenance and original
- Location in the original source
- Abstract; publication date and DOI
Inspect structured data
- Content version
- 2b143444f989a56e6c7467a22c179e07563a786f499352c0db33fa9fe98daea8
- Source version
- editorial-source-set.v1@1ecd5234f5ad3cde18b06a5bf488e56603f8e93bb3ee6a9bf2d01cb1e470fba3
- Updated
- 2026-10-01