Danio rerio
In brief
The zebrafish, Danio rerio, is a small freshwater fish from South Asia, recognizable by dark horizontal stripes along its body. [2]
Evidence for this statement
Editorial synthesis
Where to check this statement
- evidence id
- A10-F
- locator
- Environment; Distribution; Short description
Photographs and illustrations
Save, investigate and check this version
Editorial draft · human review pending
Ask about this materialOn this page
Introduction
It belongs to the family Danionidae within the ray-finned fishes.
[1]Evidence for this statement
Editorial synthesis
Where to check this statement
- evidence id
- A10-N
- locator
- Lineage: Actinopterygii; Danionidae
A striped body built from living cells
Its body is slender and flattened from side to side, with small barbels around the mouth.
[2]Evidence for this statement
Editorial synthesis
Where to check this statement
- evidence id
- A10-F
- locator
- Short description: fusiform, laterally compressed body; rostral and maxillary barbels
The characteristic five body stripes continue onto the tail fin, and the anal fin is also striped.
[2]Evidence for this statement
Editorial synthesis
Where to check this statement
- evidence id
- A10-F
- locator
- Short description: horizontal stripes and fins
At the cellular level, dark melanophores, yellow or orange xanthophores and reflective iridophores together produce the adult pattern.
[5]Evidence for this statement
Editorial synthesis
Where to check this statement
- evidence id
- A10-P
- locator
- Abstract; Author Summary
These cells interact during development: experimentally removing iridophores can disrupt the arrangement of the other pigment cells.
[5]Evidence for this statement
Editorial synthesis
Where to check this statement
- evidence id
- A10-P
- locator
- Results: iridophore ablation; Abstract
The adult stripes are not simply the embryo’s markings enlarged, because a new pattern develops during the transition toward adulthood.
[5]Evidence for this statement
Editorial synthesis
Where to check this statement
- evidence id
- A10-P
- locator
- Introduction: distinct early-larval and adult pigment patterns
Spawning and the first stages of life
Zebrafish reproduce through eggs that are fertilized outside the female’s body.
[7]Evidence for this statement
Editorial synthesis
Where to check this statement
- evidence id
- A10-W
- locator
- Experimental accessibility
During courtship, males swim close to females and try to guide them toward a spawning site, where females release eggs onto the substrate.
[6]Evidence for this statement
Editorial synthesis
Where to check this statement
- evidence id
- A10-R
- locator
- Background: spawning and courtship paragraphs
Some males defend a spawning area, whereas others pursue females without holding such a territory.
[6]Evidence for this statement
Editorial synthesis
Where to check this statement
- evidence id
- A10-R
- locator
- Background: territorial and non-territorial courtship
After fertilization, yolk-poor cytoplasm gathers at one pole of the yolky egg and forms the disc in which early cell divisions occur.
[8]Evidence for this statement
Editorial synthesis
Where to check this statement
- evidence id
- A10-Z
- locator
- Zygote Period: 1-cell stage
Cleavage partitions that disc into cells without dividing the whole yolk into separate cells.
[9]Evidence for this statement
Editorial synthesis
Where to check this statement
- evidence id
- A10-C
- locator
- Cleavage Period: meroblastic divisions
Later, the embryo lengthens, repeated body segments form and early organ structures become visible.
[10]Evidence for this statement
Editorial synthesis
Where to check this statement
- evidence id
- A10-S
- locator
- Segmentation Period: opening paragraph
Hatching occurs at variable times, commonly during the third day under the standard laboratory conditions used in the classic staging series.
[13]Evidence for this statement
Editorial synthesis
Where to check this statement
- evidence id
- A10-E
- locator
- Hatching Period: first paragraph
That series uses 28.5 °C as its reference temperature, and changing temperature changes the pace of development.
[11]Evidence for this statement
Editorial synthesis
Where to check this statement
- evidence id
- A10-T
- locator
- Temperature and Standard Developmental Time
The jaws, gills and paired pectoral fins continue taking shape around this period.
[13]Evidence for this statement
Editorial synthesis
Where to check this statement
- evidence id
- A10-E
- locator
- Hatching Period: organ rudiments, fins and jaws
Feeding and life on a floodplain
A field survey in Bangladesh found zebrafish especially abundant in shallow ponds, lakes and ditches in open settings, often with vegetation along their margins.
[3]Evidence for this statement
Editorial synthesis
Where to check this statement
- evidence id
- A10-H
- locator
- Abstract: surveyed habitats and highest abundance
The findings associate these fish with floodplain waters rather than making them specialists of the main river channel.
[3]Evidence for this statement
Editorial synthesis
Where to check this statement
- evidence id
- A10-H
- locator
- Abstract: floodplain rather than riverine species
A separate Bangladesh study found that zooplankton and insects were the main foods.
[4]Evidence for this statement
Editorial synthesis
Where to check this statement
- evidence id
- A10-D
- locator
- Abstract: diet
In that study, the principal breeding season began just before the monsoon, and growth was fastest early in life during the monsoon season.
[4]Evidence for this statement
Editorial synthesis
Where to check this statement
- evidence id
- A10-D
- locator
- Abstract: recruitment and seasonal growth
Those field observations differ from laboratory conditions, under which spawning can occur throughout the year.
[6]Evidence for this statement
Editorial synthesis
Where to check this statement
- evidence id
- A10-R
- locator
- Background: laboratory breeding throughout the year
Why this fish matters to research
Because the embryo is accessible and optically clear, researchers can watch tissues develop and follow cells in a living vertebrate.
[7]Evidence for this statement
Editorial synthesis
Where to check this statement
- evidence id
- A10-W
- locator
- Experimental accessibility; Optical transparency
Pigment-cell experiments show how zebrafish can connect an easily visible feature, such as a stripe, to the interactions that build it.
[5]Evidence for this statement
Editorial synthesis
Where to check this statement
- evidence id
- A10-P
- locator
- Abstract; Results: iridophore ablation
Behaviour also depends on circumstances: in an aquarium experiment, territorial males had greater reproductive success at low density, but not at high density.
[6]Evidence for this statement
Editorial synthesis
Where to check this statement
- evidence id
- A10-R
- locator
- Abstract: Results; Discussion: density-dependent reproductive success
Developmental stage is not simply elapsed time
Kimmel and colleagues stress that embryos can differ in developmental stage even within one clutch.
[12]Evidence for this statement
Editorial synthesis
Where to check this statement
- evidence id
- A10-I
- locator
- Introduction: developmental variability
Morphology is therefore more informative than assuming that all embryos of a given age are equivalent.
[12]Evidence for this statement
Editorial synthesis
Where to check this statement
- evidence id
- A10-I
- locator
- Introduction: rationale for staging
An embryo remaining inside its chorion need not be developmentally behind one that has already hatched.
[13]Evidence for this statement
Editorial synthesis
Where to check this statement
- evidence id
- A10-E
- locator
- Hatching Period: first paragraph
Separate pattern, parentage and habitat evidence
Patterson and Parichy used iridophore ablation to test effects on the developing arrangements of melanophores and xanthophores, rather than inferring interactions from colour alone.
[5]Evidence for this statement
Editorial synthesis
Where to check this statement
- evidence id
- A10-P
- locator
- Abstract; Results: iridophore ablation
Spence, Jordan and Smith assigned parentage genetically to offspring sampled after hatching.
[6]Evidence for this statement
Editorial synthesis
Where to check this statement
- evidence id
- A10-R
- locator
- Methods: Experiment; Parentage analysis
They explicitly distinguish this measure from fertilization success, because survival between fertilization and hatching can also affect which offspring are counted.
[6]Evidence for this statement
Editorial synthesis
Where to check this statement
- evidence id
- A10-R
- locator
- Discussion: fertilization-rate and embryo-survival caveat
The two Bangladesh field-study abstracts report habitat associations, food and seasonal growth, not one universal schedule for every population or laboratory line.
[3] [4]Evidence for this statement
Editorial synthesis
- Wiley / Journal of Fish Biology · 10.1111/j.1095-8649.2006.01206.x
- Wiley / Journal of Fish Biology · 10.1111/j.1095-8649.2007.01492.x
Where to check this statement
- evidence id
- A10-H
- locator
- Abstract
- evidence id
- A10-D
- locator
- Abstract
From this article to your own question
Choose a statement in this article and open its evidence. Record whether it concerns the whole species, a particular specimen or specific study conditions. Then follow a suitable guide to preserve identifiers and state which evidence your question still needs.
Evidence for this statement
EcoGenesis
Continue exploring
Sources and versions
Editorial draft · human review pending
- NCBI Taxonomy · 7955
2026-09-06 · No source asset reused.
Provenance and original
- Location in the original source
- Taxonomy ID; current name; rank; common names; homotypic synonyms; lineage, including Danionidae.
- FishBase · Danio-rerio
2026-09-06 · Exact image licenses not verified; no asset copied.
Provenance and original
- Location in the original source
- Classification; Environment; Distribution; Short description; Biology; Life cycle and mating behavior; image credits and page modification footer.
- Wiley / Journal of Fish Biology · 10.1111/j.1095-8649.2006.01206.x
2026-09-06 · No full-text or figure reuse permission verified.
Provenance and original
- Location in the original source
- Complete Abstract and bibliographic metadata; published 31 October 2006.
- Wiley / Journal of Fish Biology · 10.1111/j.1095-8649.2007.01492.x
2026-09-06 · No source asset reused; full-text reuse rights not checked.
Provenance and original
- Location in the original source
- Complete three-sentence Abstract; title, authors and date, first published 20 June 2007.
- PLOS Genetics · 10.1371/journal.pgen.1003561
2026-09-06 · Creative Commons Attribution License stated; exact version not independently resolved.
Provenance and original
- Location in the original source
- Abstract; Author Summary; Introduction opening on pigment classes and two life-cycle patterns; Results text on iridophore ablation and localized Csf1; copyright.
- Frontiers in Zoology / Springer Nature · 10.1186/1742-9994-3-5
2026-09-06 · CC BY 2.0 as linked in Rights and permissions.
Provenance and original
- Location in the original source
- Abstract; Background on zebrafish reproduction and courtship; Results; Discussion caveat on survival to hatching; Methods: Experiment and Parentage analysis; rights.
- NICHD / Brant Weinstein laboratory · https://www.nichd.nih.gov/research/atNICHD/Investigators/weinstein/zebrafish
2026-09-06 · No individual image rights verified; no source image reused.
Provenance and original
- Location in the original source
- Experimental accessibility; Optical transparency; content-owner and review-date footer.
- ZFIN / The Zebrafish Book · 10.1002/aja.1002030302
2026-09-06 · Copyright 1995 Wiley-Liss; ZFIN says reprinted by permission, not a reuse license to EcoGenesis.
Provenance and original
- Location in the original source
- Zygote Period; complete body: newly fertilized egg and 1-cell stage
- ZFIN / The Zebrafish Book · 10.1002/aja.1002030302
2026-09-06 · Copyright 1995 Wiley-Liss; ZFIN says reprinted by permission, not a reuse license to EcoGenesis.
Provenance and original
- Location in the original source
- Cleavage Period; complete description, not detailed stage subpage or figures
- ZFIN / The Zebrafish Book · 10.1002/aja.1002030302
2026-09-06 · Copyright 1995 Wiley-Liss; ZFIN says reprinted by permission, not a reuse license to EcoGenesis.
Provenance and original
- Location in the original source
- Segmentation Period; opening five paragraphs through somite differentiation
- ZFIN / The Zebrafish Book · 10.1002/aja.1002030302
2026-09-06 · Copyright 1995 Wiley-Liss; ZFIN says reprinted by permission, not a reuse license to EcoGenesis.
Provenance and original
- Location in the original source
- Temperature and Standard Developmental Time; main prose on 28.5 C, rate and synchronization
- ZFIN / The Zebrafish Book · 10.1002/aja.1002030302
2026-09-06 · Copyright 1995 Wiley-Liss; ZFIN says reprinted by permission, not a reuse license to EcoGenesis.
Provenance and original
- Location in the original source
- Introduction; opening three paragraphs on variability and morphological staging
- ZFIN / The Zebrafish Book · 10.1002/aja.1002030302
2026-09-06 · Copyright 1995 Wiley-Liss; ZFIN says reprinted by permission, not a reuse license to EcoGenesis.
Provenance and original
- Location in the original source
- Hatching Period; first six paragraphs through fin, mouth and jaw development
Inspect structured data
- Content version
- 5c75382de356e3e267e91da261fbc8cc5aaa38ad635da4580d8b3f61bf8b69d3
- Source version
- editorial-source-set.v1@9fa8ee222f3aa4c877cfea653e93e4a4dca373efef75c3ab9e7c5247f582cbd2
- Updated
- 2026-09-19